Predict the product(s) of the reaction below, and used curved arrows to show a mechanism.
You know this is an elimination reaction because no nucleophile is present; H3PO4 and H2SO4 are non-nucleophilic acids. IF the reagent were HCl or HBr on the other hand, this would be a substitution reaction.
Since acid is present, a carbocation will probably form, so we know that this is an E1 mechanism.
The 2º carbocation that is initially formed will undergo a 1,2-hydride shift to become a 3° carbocation, but that doesn't affect the final product of the reaction; with either the 2° or 3° carbocation, the most stable alkene product is 2-methyl-2-butene.
MendelSet practice problem # 341 submitted by Matt on June 7, 2011.
Two stereoisomers of trimethylcyclohexane are shown below (compounds A and B). Compare cyclohexane chair forms to determine which isomer has a lower heat of combustion. Explain your reasoning.
A has a chair form that avoids having any substituents in the axial position.
B's most stable chair form has one axial substituent.
So A is more stable than B. Therefore, B is higher eneregy and has a higher heat of combustion than A.
MendelSet practice problem # 318 submitted by Matt on June 7, 2011.
For a molecule to undergo an E2 reaction, the leaving group and the beta-proton must be in an anti-coplanar conformation (one atom straight up, the other straight down). Based on this, which compound undergoes E2 reaction with KOtBu faster? Why?
The methyl group is bulky and so is most stable in the equatorial position.
The 1,4 cis compound's most stable chair form has its leaving group (Br) and beta-hydrogen in an anti-coplanar (anti-periplanar in some textbooks) conformation.
So most of the time, 1,4 cis is in a chair conformation that is able to undergo an E2 reaction.
The opposite is true for the 1,4 trans compound. Most of the time it is in a chair conformation that is unable to undergo an E2 reaction.
Therefore, the 1,4 cis compound will undergo an E2 elimination reaction faster than the 1,4 trans compound.
MendelSet practice problem # 319 submitted by Matt on June 7, 2011.
Carbocations aren't very stable and so don't last very long after they are formed.
Use curved arrows to show:
a) how a carbocation reacts with a halide ions to form an alkyl halide.
b) how a carbocation reacts with water to form an alcohol.
c) how a carbocation reacts with a base to form an alkene.
For a), the product is neutral and so you are done after the nucleophile (Cl-) attacks the carbocation.
For b), the the intermediate is a protonated alcohol, and so you must do a proton exchange step (also called a hydrogen exchange or deprotonation) to get the final alcohol product, which is neutral.
For c), there are two different types of beta hydrogens, and so two different alkenes are possible.
The more stable alkene is the one that will form, and this will always be the most highly substituted alkene. This is Zaitsev's rule. The rationale for this is hyperconjugation: neighboring carbon atoms stabilize an alkene.
MendelSet practice problem # 335 submitted by Matt on June 7, 2011.
Indicate the reagents necessary to carry out each transformation.
These are substitution reactions. In each case we're replacing the -OH with either -CN or -I, so the nucleophiles will be NaCN or NaI (SN2 conditions).
Hydroxide (HO-) is a poor leaving group, so the first step in each of these reactions will be to convert the alcohol into a better leaving group. Two good leaving groups are Br- and SO3R-, but which one to use?
Every time an SN2 reation takes place the wedge on the alpha carbon becomes a dash (and vice-versa).
For a), the wedge remains a wedge, so we have to do two SN2 reactions (wedge to dash to wedge again). So we use PBr3 to turn the OH into a Br. (Bromination of an alcohol with PBr3 is an SN2 reaction and so inverts stereochemistry).
For b), the wedge becomes a dash, so we can only do one SN2 reaction. So instead of using PBr3 to make the OH a better leaving group, we use RSO2Cl, which doesn't break the carbon-oxygen bond and so doesn't invert the stereochemistry.
MendelSet practice problem # 537 submitted by Matt on July 2, 2011.
For each reaction below, determine whether the primary reaction is SN1, SN2, E1, or E2, and then draw the product.
Note: Me = methyl (CH3)
Predicting SN1/SN2/E1/E2 competition reactions tends to drive students crazy, but it's not so bad once you notice the general pattern:
basic conditions (positive and negative charges) tend to go SN2 or E2 (no carbocation)
neutral or acidic conditions tend to go SN1 or E1 (carbocation is formed).
That's how you determine a SN1/E1 reaction from an SN2/E2 reaction. But how to decide between substitution or elimination? General things to watch for are bulk, nucleophilicity, and heat:
If you see heat (or Δ), the reaction will go elimination.
If you see a big, bulky compound, the reaction will go elmination.
If you see a strong base, the reaction will go elimination. Strong base is anything stronger than RO-.
The exception: if everything is primary, it will probably go SN2.
These rules probably seem confusing, so let's go through these eight examples and see how they apply.
a) NaCN is charged! (Na+ and CN-), so it's SN2 or E2. CN is not a strong base, so it's SN2.
b) KOtBu (potassium tert-butoxide) is charged, so it's SN2 or E2. -OtBu is a strong base, so if anything is more bulky than 1º it will go E2. -OtBu is 3º, so it will definitely go E2 (KOtBu is a classic E2 reagent).
c) NaOMe is charged so E2 or SN2. NaOMe is a strong base, so if anything >1º it will go E2. -OMe is 1º (actually, not even 1º), but the alkyl halide is 2º, so it will go E2.
d) NaOMe is charged so E2 or SN2. NaOMe is a strong base, so if anything >1º it will go E2. But in this case there is no bulk whatsoever- nothing is >1º! NaOMe is 1 and the alkyl halide is also 1º, so it will go SN2.
e) Methanol (MeOH) is neutral so probably E1 or SN1. Methanol is a weak base and there's no bulk, so SN1. In general water and alcohol do a mixture of SN1 and E1 with alkyl halides (mostly SN1).
f) H2SO4 is acidic so probably E1 or SN1. Can't be SN1 though because there is no nucleophile in H2SO4. (HSO4- is a very weak nucleophile). An alcohol with H2SO4 or H3PO4 is a dehydration reaction- E1.
g) H2SO4 is acidic so probably E1 or SN1. In this case we have a nucleophile- Cl-, so it will go SN1.
h) Amines are neutral but they don't so SN1/E1- they tend to go SN2/E2, because they are basic (an amine solution has a basic pH). This amine is really bulky so it will go E2.
MendelSet practice problem # 560 submitted by Matt on July 7, 2011.
Show two ways to prepare the ether below from a combination of an alcohol and an alkyl halide via the Williamson ether synthesis.
Is one way better than the other? Why?
The Williamson ether synthesis takes place in two steps. First an alcohol is deprotonated to form a strong nucleophile (RO-, this step isn't shown in the image below). Then the alkoxide (negative alcohol) attacks an alkyl halide in an SN2 reaction.
So this problem is really asking, which step of conditions is most favorable for an SN2 reaction?
Recall that SN2 reactions compete with E2 reactions. If the nucleophile is too basic, or if there is too much bulk, it will go E2 instead of SN2. (See problem 560 for a full explanation of these competition reactions)
Below, the top combination uses the less substituted (1º) alkyl halide, and so is the best for an SN2 reaction.
The bottom reaction uses a bulkier (2º) alkyl halide, and will probably give a higher percentage of E2 side reaction.
MendelSet practice problem # 703 submitted by Matt on July 21, 2011.
Predict the product(s) of the reaction below, and used curved arrows to show a mechanism.
The 2° carbocation formed immediately undergoes a 1,2-methyl shift (a rearrangement) to form the more stable 3° carbocation, so the product is the 3° alkyl chloride instead of the 2º alkyl chloride, which would have formed in the absence of rearrangement.
MendelSet practice problem # 337 submitted by Matt on June 7, 2011.
After a sample of optically pure (S)-2-ethyl-cyclohexanone is dissolved in an aqueous solution for several hours, a significant loss of optical activity is observed. Explain.
Carbonyls are in equilibrium with their enol forms. This process is called keto-enol tautomerization. (See problems 738 and 739). So when this compound is placed in water a small amount of it will constantly be converted to its enol form, and then back again to the carbonyl form.
But the enol form is achiral! (the alpha carbon is sp2 instead of sp3 as in the carbonyl form).
So when the achiral enol goes back to its carbonyl form, half will become (S) and the other half will become (R). The stereocenter becomes "scrambled." The process of an optically pure compound becoming a racemic mixture is called racemization.
MendelSet practice problem # 744 submitted by Matt on July 27, 2011.
E2 elimination reactions require anti-coplanar geometry. (note: some textbooks call this anti-periplanar).
Let's work through an E2 reaction, and rotate the molecule eblow into an anti-coplanar geometry to predict the product of this E2 reaction.
To predict the stereochemistry of the alkene product from an E2 reaction, we have to rotate the leaving group (Br) and the beta-proton into anti-coplanar geometry. It's easiest to put the H and Br in the plane of the page.
After we do this, we see that both the ethyl and phenyl groups are wedges, and the two methyls are dashes. So after the E2 reaction, the resulting alkene will have its two methyl groups cis to each other.
MendelSet practice problem # 531 submitted by Matt on July 2, 2011.
Let's work through anti and syn additions to alkenes.
Show the product for each reaction below, and indicate whether the product will be a racemic mixture of enantiomers, or a meso compound (which is achiral).
The reaciton of an alkene with Br2 is an anti-addition, and hydrogenation (H2 or D2) is a syn addition. From this we can figure our the relative stereochemistry of each product.
Each starting material is achiral, and therefore not optically active, so the products cannot be optically active.
There are three ways for products not to be optically active:
products can be achiral
products can be a racemic mixture
products can be meso
In both a) and b) each product has a sterocenter, so the products can't be achiral.
In a), one stereocenter is S and the other stereocenter is R, and both with the same substituents, so this is a mirror image relationship, and the products are meso.
In b), the products have no internal mirror planes, so the products are chiral, and must be a racemic mixture.
MendelSet practice problem # 530 submitted by Matt on July 2, 2011.
Indicate the major organic product of the reaction below. Include stereochemistry.
This is a hydrogenation reaction. The product is an alkane. But this product has two stereocenters.
Normally, the product would be a racemic mixuture of enantiomers (equal amounts of each stereoisomer). But in this case, the starting material is optically active (chiral but not racemic), so the products won't be equal and opposite as usual.
Since there is a substitutent blocking the top face of the molecule (isopropyl is a wedge), the hydrogens will preferentially add to the opposite face of the molecule (dashes).
MendelSet practice problem # 529 submitted by Matt on July 2, 2011.
Indicate which of the molecules below are chiral (if any).
There are several types of chirality. In undergraduate organic chemistry, most chiral molecules exhibit point chirality- they have at least one sterocenter and don't have a plane of symmetry. Molecules a) and b) both have stereocenters, but they also both have planes of symmetry, so neither is chiral (they are both meso compounds).
Molecule can also be chiral about an axis. The classic example of this is allenes- molecules with two consecutive double bonds. Compound c) has a plane of symmetry so it can't be chiral. It might be hard to see, but compound d) is in fact chiral- it's mirror images are non-super impossible. It has a "chirality axis." Just like a screw can be right-handed or left-handed, so can molecule d).
MendelSet practice problem # 528 submitted by Matt on July 2, 2011.
Determine a synthesis to prepare 2-chloro-4-methylpentane from 1-iodo-4-methylpentane.
from
1-iodo-4-methylpentane is reacted with KOt-Bu(potassium tert-butoxide) to afford 4-methyl-1-pentene(E2 Reaction). Next, this product is reacted with HCl to perform a markovnikov addition addition across a double bond and afford the desired product, 2-chloro-4-methylpentane.
MendelSet practice problem # 1336 submitted by reifa on October 26, 2011.
For the reaction below, draw the structures of the radical intermediate and the final product.
When HBr reacts with in an alkene in the presence of peroxides (which are free radical initiators), the reaction goes through a free radical mechanism and adds in an anti-Markovnikov manner. The product is an alkyl bromide.
The reaction goes anti-Markovnikov because the more substituted radical intermediate is only formed if the bromine adds to the less substituted carbon.
MendelSet practice problem # 345 submitted by Matt on June 7, 2011.
Let's work through an alkene addition reaction. Draw the structures for each of the species in the three boxes below (3º carbocation, protonated thiol, and thiol). Also draw curved arrows to show electron movement. Note: thiol = RSH, like an alcohol, but with sulfur instead of oxygen.
Note that this is the reverse of problem 519. Instead of going from thiol (alcohol) to carbocation to alkene, we're going from alkene to carbocation to thiol. In each step ask yourself "what arrows can I draw?" and choose the step that doesn't go backwards.
The first step is the alkene picks up a proton to form the more stable carbocation. (See problem 334 if you don't understand why only the 3º carbocation is formed). To get rid of the carbocation, we can either do a beta-elimination (E1) to form an alkene, or an addition reaction (SN1) to form a protonated thiol. Since forming the alkene would be going backwards, the only choice is addition.
Then you're left with a protonated thiol. How do we get rid of the positive charge on the sulfur? There are two legal moves- either the RSCH2CH3 acts as a leaving group, or the sulfur deprotonates. Since the RSCH2CH3 leaving would form a carbocation and take us backwards, the only option is for the sulfur to deprotonate.
Because the sulfur added to the more substituted carbon, this was a Markovnikov addition.
MendelSet practice problem # 520 submitted by Matt on June 30, 2011.
Fill in the product for each reaction below. Indicate stereochemistry where appropriate.
-OtBu is a big, bulky base, and so will do an E2 reaction with the alkyl halide. The elimination product can be either a cis or trans alkene, but trans is usually the major product (cis alkenes have steric strain).
The alkene then reacts with Br2 to form 2,3-dibromobutane, which can undergo two consecutive E2 reactions with -OtBu to form an alkene and then the alkyne (2-butyne).
Finally, the alkyne reacts with the first equivalent of Br2 to form the trans 2,3-dibromo-2-butene, which reacts with a second equivalent of bromine to form the tetrabromo alkane.
MendelSet practice problem # 562 submitted by Matt on July 8, 2011.
Fill in the product for each reaction below. Indicate stereochemistry where appropriate.
NaNH2 is a very strong base (the pKa of ammonia, its conjugate acid, is about 35) and will easily depronate a terminal alkyne (pK ~ 25), producing a negatively charged alkyne carbon (an acetylide).
The acetylide is a strong nucleophile and will undergo an SN2 reaction with the 1ºalkyl halide. (acetylide is also a strong base, so with 2º or bulkier alkyl halides, it will go E2 instead).
Finally, Lindlar's catalyst will reduce the alkyne to a cis alkene.
MendelSet practice problem # 561 submitted by Matt on July 8, 2011.
Compound A (C5H12O) is oxidized using aqueous chromium (Jones reagent) to compound B (C5H10O2), which is then treated with methanol under acidic conditions to yield compound C (C6H12O2) and water.
The 1H NMR of compound C is shown below. Determine the structures of compounds A, B, and C.
Let's solve this NMR structure elucidation problem using steps similar to those used in problem 662.
1.Are there any hints?
Compound A has one oxygen and after treatment with aqueous chromium becomes compound B, which has two oxygens. This means A is probably an alcohol, B is probably a carboxylic acid.
Compound B is then treated with methanol under acidic conditions to form compound C. These are conditions for a Fischer esterification, so C is probably the methyl ester.
2.How many IHD are there?
Compound A: C5H12O = C5H12 should be C5H12 (CnH2n+2) so 0 IHD.
Compound B: C5H10O2 = C5H10 should be C5H12. Missing 2H, so 1 IHD.
Compound C: C6H12O2 = C6H12 should be C6H14. Missing 2H, so 1 IHD.
These IHD counts fit our assumptions from part 1).
3.Draw some structures and eliminate, learn, repeat.
Some clues from the NMR:
The isopropyl splitting pattern is present: d(6) (signal c at ~0.9 ppm) and multiplet(1) (signal b at ~2.4 ppm).
The s(3) at ~3.7 ppm is probably the methyl group from the methyl ester.
We know from before we have one IHD, and it's probably an ester.
So start drawing structures and eliminate those that don't fit the data!
MendelSet practice problem # 679 submitted by Matt on July 19, 2011.
Show how each compound can be prepared from an alkene containing 3 carbons (or less).
Each answer will involve the reaction of a Grignard with either a carbonyl or epoxide.
Note: epoxides are prepared from alkenes using a peroxy acid (epoxidation) such as mCPBA.
The trick to synthesis problems in second semester organic chemistry to recognize that alcohols ARE ketones ARE carboxylic acids. What do I mean? Alcohols, ketones/aldehydes, and carboxylic acids can all be easily converted using PCC or Jones Reagent (NaCr2O7/H2SO4).
For example, for a), the product is a ketone, but it may as well be an alcohol, because alcohols can be converted to ketones with PCC.
b) is similar, except the position of the alcohol (one away from the "bond cut", instead of directly connected to the cut as in a) ) indicates the starting material was an epoxide and not a carbonyl.
c) is just like b), except instead of PCC, use Jones Reagent to oxidize the alcohol all the way to a carboxylic acid.
MendelSet practice problem # 673 submitted by Matt on July 19, 2011.
Complete each synthesis below. All carbon sources must come from alkenes.
Each synthesis will involve protecting groups.
The protecting group most commonly used for aldehydes and ketones (in undergraduate orgo) is ethylene glycol.
It is put on using HOCH2CH2OH/H+ and removed with H2O/H+.
For a), the reaction calls for the use of acetylide with an alkyl halide. But acetylides also react with carbonyls.
So before the alkyne is deprotonated using a strong base (such as NaNH2), the carbonyl must be protected with ethylene glycol.
For b), the reaction calls for the addition of two equivalents of phenyl Grignard to the ester. The problem is that esters aren't as reactive as ketones (or aldehydes), so the Grignard would react with the ketone before it ever touched the ester! To prevent this, the ketone must be protected before Grignard is added.
MendelSet practice problem # 714 submitted by Matt on July 22, 2011.
Show how to prepare each compound starting from propylene oxide.
(Propylene oxide image below courtesy of Wikipedia.)
Epoxides can open up in two different ways.
To add a nucleophile to the less substituted side of an epoxide, use basic conditions. This is done in #2 below.
To add a nucleophile to the more substituted side of an epoxide, use acidic conditions. This is done is #1 below.
Why do the conditions matter? Epoxides have two electrophilic carbons. Normally nucleophiles will preferentially attack the less substituted carbon, as they do in SN2 reactions. Recall that SN2 reactions usually happen with strong nucleophiles- that is, negative charges (basic conditions).
When an epoxide reacts under acidic conditions, the transition state has carbocation character, and so it's sort of like an SN1 reaction. That is, instead of less substituted carbons being favored due to less steric bulk, more substituted carbons are favored do to a more stable carbocation. So acidic conditions cause an epoxide to open up on the more substituted side.
MendelSet practice problem # 702 submitted by Matt on July 21, 2011.
Show how each compound can be prepared from the indicated starting material.
All carbon sources must contain three carbons or less.
a) When you see 2 carbons and 1 oxygen, that the tell-tale sign that you're adding ethylene oxide (the simplest epoxide).
But that would only leave you with an alcohol. How do you get to the ether? Using the Williamson ether synthesis.
b) As I mentioned in problem 673, when you see an alcohol you are also looking at a carbonyl, because you can interconvert the two (alcohol to aldehyde/ketone using PCC, aldehyde/ketone to alcohol using NaBH4).
To add the methyl group, convert the alcohol to a ketone (which is an electrophile), and then add methyl Grignard (a nucleophile). But once again, you are only left with an alcohol. How to convert it to an ether? The Williamson ether synthesis.
When you see an ether in a synthesis problem, remember the Williamson ether synthesis. It will come in handy.
MendelSet practice problem # 699 submitted by Matt on July 21, 2011.
Show how each alcohol can be prepared from a combination of a carbonyl and a Grignard reagent.
The trick to these retrosynthesis problems is to determine where the connections or "cuts" were made.
The carbonyl carbon becomes an alcohol after a Grignard reaction, so that's where the "cut" must be.
Note that there can often be more than one correct answer to these types of problems.
For a), adding propyl Grignard to acetone or methyl Grignard to 2-pentanone will result in the product.
We can also use two equivalents of methyl Grignard with 4-carbon ester, such as ethyl butanoate. Esters contains a build in leaving group (-OR) and so react twice with Grignards.
For b), adding phenyl Grignard to cyclopentanone will do the job.
MendelSet practice problem # 668 submitted by Matt on July 18, 2011.
Write out a mechanism for the reaction below using curved arrows. Be sure to include formal charges.
Ethers react with 2 equivalents of H-X to form water and two equivalents of alkyl halide.
In this case, the ether was cyclic, so the ring had to open up.
The reaction can go through either an SN1 or SN2 mechanism. Since this was a primary ether, it will go through an SN2 mechanism (the carbocation is too unstable for the reaction to go SN1).
MendelSet practice problem # 700 submitted by Matt on July 21, 2011.
Draw out the mechanism for the addition of excess phenyl Grignard to the carbonyl compound below.
This carbonyl has two leaving groups attached to it- each of those oxygens can take part in a nucleophilic acyl substitution reaction and form a new carbonyl product.
First the Grignard attacks the oxidation state IV carbonyl carbon (4 oxygen bonds, so oxidation state 4). The carbonyl itself will act as a leaving group and form a tetrahedral intermediate. But tetrahedral intermediates don't last if there are any leaving groups attached to the carbon, so the -O will "come back down again", kick off an oxygen leaving group, and reform the carbonyl.
Then a second equivalent of Grignard will attack that carbonyl (an ester), and we will do another nucleophilic acyl substitution reaction to form yet another carbonyl.
Finally, the third carbonyl doesn't have any leaving groups built in (it's a ketone), so when the third equivalent of Grignard attacks it, it will do a nucleophilic acyl addition reaction, and the product will be an alcohol.
Notice that as the reaction progresses the oxidation state of the carbonyl carbon (number of oxygen bonds attached to it) goes down form 4 to 3 to 2 and then to 1.
MendelSet practice problem # 670 submitted by Matt on July 18, 2011.
Show a mechanism for the reduction of butyrolactone using LiAlH4.
Hydride reagents such as LiAlH4 and NaBH4 behave like hydride nucleophiles (H-), so that's what I used as shorthand. The real mechanism is very similar but involves aluminum coordinating to the oxygen.
Notice that the the ester will reform the carbonyl after the first hydride attacks. This is because esters have a built in leaving group, and so undergo nucleophilic acyl substitution reactions. The aldehyde that forms then undergoes a nucleophilic acyl addition reaction with the second equivalent of hydride.
Also note that you can't stop the reaction halfway at the aldehyde- LiAlH4 will take an ester all the way down to an alcohol.
MendelSet practice problem # 674 submitted by Matt on July 19, 2011.
Compound A has molecular formula C6H12O and shows a sharp peak at 1,710 cm-1 in its IR spectrum.
Treatment with 1 equivalent of phenyl Grignard yields compound B, which has formula C12H18O and whose IR shows a broad peak at 3,350 cm-1.
Compound B's 1H NMR spectrum is shown below. Determine the structures of compounds A and B.
Let's use steps similar those outlined in problem 662 to solve this NMR structure elucidation problem.
1.Are there any hints?
Yes, from the IR peaks. The starting material is a carbonyl (sharp IR peak at ~1,700 cm-1) and the product is an alcohol (broad IR peak ~3,300 cm-1).
2.How many IHD are in each compound? (also known as degrees of unsaturation or DBE).
C6H12O is the same as C6H12 (ignore oxygen) which should be C6H14 if fully saturated (CnH2n+2). It's missing 2 hydrogens so C6H12O has 1 IHD. This 1 IHD must be the carbonyl.
C12H18O is the smae as C12H18 which should be C12H26 if fully saturated. It's missing 8 hydrogens so it has 4 IHD. The benzene from the Grignard reagent must account for all 4 IHD.
3.Draw some C6H12O and C12H18O structures and elminate those that don't fit the data, then learn and repeat.
Things we know from the problem and NMR:
The starting material is a carbonyl and we're adding a Grignard, so we expect the product to be an alcohol. The NMR shows a peak that disappears with D2O addition, which also confirms that the product is an alcohol.
The product must have a benzene ring because the reagent was phenyl Grignard. That accounts for the aromatic signals (~7 ppm) and the 4 IHD in the product.
the NMR shows a doublet with an integration of 6 and a multiplet with an integration of 1. This is the splitting pattern on an isopropyl group.
The NMR also shows a quartet with an integration of 2 and a triplet with an integration of 3. This is the splitting pattern of an ethyl group.
Once you have a few clues from the NMR, start drawing structures! And then elminiate those that do not fit the data (too many signals, wrong multiplicity/integrations etc.).
MendelSet practice problem # 672 submitted by Matt on July 18, 2011.
The mass spec of 4-nonanone shows peaks at m/z = 58, 71, 86, 99.
Using curved arrows or hooks, show how each of these fragments can form via alpha cleavage or the McLafferty rearrangement. (and draw the structure of the indicated species in the appropriate box).
Note that I drew the McLafferty rearrangements using arrows (2 electrons moving at once). Some textbooks use hooks instead, but the results are the same.
In most ungraduate organic chemistry courses, being able to draw an alpha cleavage is much more important than a being able to draw a McLafferty rearrangement (which tends to only show up on bonus problems).
MendelSet practice problem # 659 submitted by Matt on July 17, 2011.
The mass spec of methyl ethyl ether shows peaks at m/z = 45 and 59.
Use hooks to show the alpha cleavages that result in these two fragments.
MS ionization will knock off an electron from the heteroatom (atom that's not C or H), in this case, the oxygen, leaving behind a positively charge compound. This is the molecular ion (M+).
Oxygen usually undergoes homolytic cleavage- the bond splits and each atom gets one electron. Since only one electorn is involed, we use hooks instead of the usual curved arrows.
If your professor is into mass spec cleavage mechanisms, I suggest you practice this mechanism, called an alpha cleavage (see image below).
MendelSet practice problem # 658 submitted by Matt on July 17, 2011.
N,N-dimethylformamide (DMF) is shown below. Based on its structure, you might expect to see only one -CH3 signal in the 1H NMR spectrum. But instead DMF shows two different -CH3 signals. Explain.
DMF appears to have two identical methyl groups. Since these six protons are all equivalent, its 1H NMR should only show one methyl signal (singlet, 6H).
So why is that the real life the 1H NMR of DMF shows two methyl signals? (two singlets with integration of 3H).
Because DMF is an amide.Recall that the "real" structure of molecule is the a mixture of its resonance forms. DMF doesn't look like either of the two resonance forms below. In real life, its somewhere in between.
For most carboxylic acid derivatives (such as esters), the resonance form is only a minor contributor and so the real "picture" looks very close to the carbonyl Lewis structure.
But for amides, its resonance form is fairly stable (it's common for nitrogen atoms to be positively charged), and so is a major resonance contributor.
In an amide, the bond between the carbonyl carbon and the nitrogen atom has a high degree of double bond character. (This also explains why it's harder to rotate the C-N "single bond" than you would expect from its Lewis structure- it's sort of like a double bond).
Because the C-N "single bond" is closer to a double bond, the two methyls are not equivalent. One methyl is cis, and the other is trans, and so they show two signals in the 1H NMR.
MendelSet practice problem # 730 submitted by Matt on July 24, 2011.
The 1H and 13C NMR spectra of an unknown compound are shown below. The compound's mass spectrum shows a molecular ion with m/z ratio of 122. Determine the structure of this compound.
This is similar to problem 665- a very difficult NMR problem because we're not given the unknown's molecular formula, only its molecular mass (122 from the molecular ion peak on the mass spec).
So the first thing we have to do is guess the molecular formula based on this mass. Here's my thought process:
There are signals in the aromatic region on the 1H NMR (~7 ppm). So we probably have at least 6 carbon's with at least 4 IHD's (a benzene ring has 4 IHD).
There are two other signals on the 1H NMR, so there are probably at least 2 more carbons, for 8 carbons in total.
8 carbons with 4 IHD would give a formula of C8H10 (C8H18 from CnH2n+2 minus 8 H's for the 4 IHDs). which only gives a mass of 106. But we need a mass of 122- we're 16 mass units short. That's exactly one oxygen!
Based on this, C8H10O is a good guess for the formula.
Now we can follow the steps laid out in problem 662:
1.Are there any hints? & 2.How many IHD are there?
Mass spec NMR problems require us to have done these two steps by now.
3.Draw some C8H10O structures with 4 IHD and eliminate, learn, repeat.
Some things we know form the NMR spectra:
Because there are only four protons in the aromatic region (total integration of 4), the benzene ring is disubstituted. The two peaks in the aromatic region (~7 ppm) are doublets with integrations of 2, so this ring is probably para substituted.
The benzene ring "uses" 6 carbons which leaves 2 carbons for the other peaks. They're probably both methyls because they both have integrations of 3. They're also both singlets, so there's not adjacent to any other carbons that have a hydrogen. The peak that's further downfield (1H ~3.8 ppm) is probably near the oxygen.
Draw a few structures based on these clues, and eventually you will come to the correct structure.
MendelSet practice problem # 666 submitted by Matt on July 18, 2011.
The 1H and 13C NMR spectra of an unknown compound are shown below. The compound's mass spectrum shows a molecular ion with m/z ratio of 86. Determine the structure of this compound.
This is a difficult problem because we are never given the compound's molecular formula, only its mass (the molecular ion is the mass of the compound).
So first, let's make a guess of this compound's molecular formula.
Do we have any clues about what atoms are present in this molecule? Yes. The 13C NMR peak at ~210 ppm indicates a carbonyl (specifically an aldehyde or ketone). So there must be at least one oxygen (and 1 IHD.)
So let's do some math:
1O is 16. Mass is 86. 86-16 - 70. That's the total mass of C's and H's we have to work with.
How many C's can we "fit" in 70? 6 C's would be 72, so let's try 5 C's.
5 C's is 60, so we need 10 H's to make 70.
So a formula of C5H10O has the correct mass. It also has the correct number of IHD (1). So let's go with it.
Now we follow the series of steps laid out in problem 662:
1.Are there any hints?
We sort of did this step already, but yes- this molecule contains an aldehyde or ketone. Since we don't see a singlet at ~10 ppm on the 1H NMR, it can't be an aldehyde. So it must be a ketone.
2.How many IHD are there? (also known as DBE or degrees of unsaturation).
C5H10O is the same as C5H10 (ignore oxygen). C5 would be C5H12 if fully saturated (because of CnH2n+2), so this molecule is missing 2 hydrogens, which corresponds to 1 IHD.
3.Draw some C5H10O structures with 1 IHD and eliminate, learn, repeat.
Some things we know from the NMR spectra:
There's a doublet with an integration of 6, and a multiplet with an integration of 1. This screams isopropyl group.
That singlet with an integration of 3 is probably a methyl group.
As mentioned above, since we don't see the aldehyde proton anywhere, the carbonyl must be a ketone.
Now draw a few candidate structures based on these clues and eliminate those structures that don't fit the data. If anything doesn't fit, you must elminate the entire structure.
These (no molecular formula, only MS data) are the hardest kinds of NMR problems you'll get in sophomore organic chemistry, so don't worry if you find it challenging- you're supposed to.
MendelSet practice problem # 665 submitted by Matt on July 18, 2011.
The 1H and 13C NMR spectra of a compound with chemical formula C4H6O2 are shown below. The compound's IR spectrum shows a sharp peak at 1,700 cm-1. Determine the structure of this compound.
For a detailed explanation of the general strategy for solving NMR structure elucidation problems, see problem 662.
Here are the steps I would take to solve this problem:
1.Are there any any hints?
Yes. The sharp IR peak at 1,700 cm-1 tells you this molecule contains a carbonyl (C=O).
2.How many IHD are there? (also known as DBE or degrees of unsaturation)
C4H6O2 is the same as C4H6 (oxygens can be ignored) which if fully saturated would be C4H10 (from CnH2n+2).
So this compound is missing 4 H's (C4H10 - C4H6), which corresponds to 2 IHD.
3. Draw some C4H6O2 structures with 2 IHD and eliminate, learn, repeat.
Some things we know so far:
From the IR we know this molecule must have a carbonyl group. This "uses" 1C, 1O, and 1 IHD so we have 3C, 1O and 1 IHD remaining to work with).
What is the the remaining 1 IHD? It's probably not another carbonyl since the 13C NMR shows only one carbonyl peak (~170 ppm). It's probably not an alkene since we don't see any vinyl hydrogen peaks on the 1H NMR (~5-6 ppm). That leaves a ring.
Another clue that this molecule contains a ring is that we only see CH2's in the 1H NMR spectrum (all peaks have an integration of 2).
The carbonyl peak on the 13C NMR spectrum is around ~170 ppm, which means it's an oxidation state III carbonyl (ester) rather than an oxidation state II carbonyl (aldehyde or ketone).
Draw a few structures based on these clues and you'll arrive at the correct answer.
MendelSet practice problem # 663 submitted by Matt on July 17, 2011.
The 1H and 13C NMR spectra of a compound with chemical formula C10H14O are shown below. The compound's IR spectrum shows a broad peak at 3,300 cm-1. Determine the structure of this compound.
Let's go through the steps you should take to solve any NMR structure elucidation problem.
1.Are there any hints?
Yes. A broad IR peak around 3,300 cm-1 tells you this compound contains an alcohol.
2. How many IHD are there?
(indices of hydrogen deficiency are also called degrees of unsaturation or double bond equivalents, depending on the textbook.)
The formula is C10H14O. That's the same as C10H14 (oxygens don't change IHD count). A fully saturated compound has formula CnH2n+2, so a C10 molecule should have 22 hydrogens (2 x 10 + 2). The difference between C10H22 and C10H14 is 8 hydrogens, which corresponds to 4 IHD.
3.Draw some C10H14O structures with 4 IHD and eliminate, learn, repeat.
This isn't shown on the image below, but if you don't have an idea of the structure of the molecule, just start drawing structures! Never look at a blank page- just start drawing structures with the correct number of IHD (in this case, 4 IHD).
The peaks around ~7 ppm on the 1H NMR tell you its probably aromatic (also, benzene has 4 IHD) so that's a good place to start. Draw a few benzene candidate structures with formula C10H14O, but then eliminate structures that don't fit the data. How? I like to go through this check list:
Eliminate by number of signals: Do the candidate structures you drew give the proper number of 1H and 13C NMR signals? If not, eliminate!
Eliminate by multiplicity: Do your structures have the correct 1H NMR multiplicities? If not, eliminate!
Eliminate by integration: Do your structures have the correct 1H NMR integrations?If not, eliminate!
Eliminate by chemical shifts: Would the structures you drew have chemical shifts that are about the same as the chemical shifts in the 1H spectrum given in the problem?
That's the order in which I usually eliminate candidate structures- fastest method (determining the number of expected NMR signals) to slowest method (predicting chemical shifts).
Some things we know so far about this molecule:
Form the IR we know It contains an alcohol.
The gigantic singlet with integration of 9 screams tert-butyl
The total integration of the aromatic region (~7 ppm) is 4, which means this molecule is disubstituted benzene. They're both doublets with integration of 2 which points to a para-substitution pattern.
As you elminate incorrect structures you will learn what fits the data, and be able to draw better candidate structures. Then you can repeat this process. Once you have a structure that passes these four problems, you probably have the correct structure.
Notice how we didn't even really need the 13C NMR to answer this problem. The 1H NMR is usually enough.
I can't stress how important it is to just draw something! Even if you have no idea what the answer might be, don't even leave a blank page for an NMR problem. Just starting drawing out structures with the proper formula and IHD count!
MendelSet practice problem # 662 submitted by Matt on July 17, 2011.
Using your knowledge of 1H NMR, predict the NMR spectrum for the compound below. (draw out the spectrum you would expect to see). Be sure to include:
peak integrations
peak multiplicities
chemical shifts (approximate)
There are four types of protons (hydrogens) in the compound below, so we would expect to see four peaks (A, B, C, and D).
A is not adjacent to any other types of protons, so its multiplicity is 1, also called singlet (s). ( n=0, so n + 1 = 0 + 1 = 1). A also is a CH3, so it will have an integration of 3. Finally, A's proton are on a carbon adjacent to an oxygen, so its chemical shit will be about ~4 ppm.
B is a CH2 so its integration is 2. It's adjacent to a 2 hydrogens (a CH2 ) so its multiplicty is 3, also called a triplet (t). (n=2, so n + 1 = 3). B is also adjacent to oxygen, so it will be close to ~4 ppm, but a little further downfield than A because it's more substituted than A.
C is also a CH2 so its integration is 2. It's also adjacent to 2 hydrogens so it's a triplet (n+1 rule). C's hydrogens are on a carbon adjacent to a carbonyl (C=O), so its chemical shift will be around ~2 ppm.
D is an aldehyde proton, which is always a singlet with near ~10 ppm. It's only one proton, so its integration is 1.
Note: notice that the aldehyde proton doesn't couple to another other protons! So even through C is surrounded by a CH2 on its left and an aldehyde proton on its right, when determining multiplicity we only count the CH2, and not the aldehyde proton.
MendelSet practice problem # 660 submitted by Matt on July 17, 2011.